Jatropha Genome Database

JcCA0134821.10 (JcS_107494.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0134821
Scaffold:
JcS_107494 JcCA0294271(+) =JcCA0134821(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl D3Y675_9ROSI 177 100.0 100.0 (tr|D3Y675) Maturase K (Fragment) OS=Jatropha curcas GN=matK PE=3 SV=1
Arabidopsis_pep ATCG00040.1 99.8 70.8 77.8 | Symbols: MATK | Encodes a maturase located in the trnK intron in the chloroplast genome. | chrC:2056-3636 REVERSE
soybean_pep --No_Hits--        
Medicago_pep IMGA|Medtr3g043760.1 90.9 57.5 63.2 Intron maturase, type II; Maturase-related, N-terminal chr03_pseudomolecule_IMGAG_V3 11997979-12000200 E EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c00552 521 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0134821.10 length: 87 aa.
IPR002866 Maturase, MatK, N-terminal
method AccNumber shortName E-value location
Biological Process GO:0006397 mRNA processing    
Cellular Component GO:0009507 chloroplast    
HMMPfam PF01824 MatK_N 5.9e-35 1-87
no_ID  
HMMPanther PTHR21464 FAMILY 1e-31 1-87
HMMPanther PTHR21464:SF3 SUBFAMILY 1e-31 1-87