Jatropha Genome Database

JcCA0132271.10 (JcS_200771.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0132271
Scaffold:
JcS_200771 JcCB0041831(-) =JcCB0062371(+) =JcCA0132271(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RK33_RICCO 858 83.6 88.4 (tr|B9RK33) Phenylalanine ammonia-lyase, putative OS=Ricinus communis GN=RCOM_1046180 PE=3 SV=1
Arabidopsis_pep AT3G10340.1 696 68.4 79.6 | Symbols: PAL4 | PAL4 (Phenylalanine ammonia-lyase 4); ammonia ligase/ ammonia-lyase/ catalytic | chr3:3204260-3207809 FORWARD
soybean_pep Glyma19g36620.1 682 68.0 80.0  
Medicago_pep IMGA|Medtr1g076720.1 678 67.6 79.2 Phenylalanine/histidine ammonia-lyase chr01_pseudomolecule_IMGAG_V3 15395552-15390975 F EGN_Mt090430 20090702
grape_pep GSVIVT01015138001 677 69.5 75.8  
castor_bean_cds 29912.m005291 731 85.4 85.4 phenylalanine ammonia-lyase, putative
castor_bean_pep 29912.m005291 858 83.6 88.4 phenylalanine ammonia-lyase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c10131 109 81.8 81.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0132271.10 length: 516 aa.
IPR001106 Phenylalanine/histidine ammonia-lyase
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016211 ammonia ligase activity    
HMMPfam PF00221 PAL 3.9e-169 47-512
PatternScan PS00488 PAL_HISTIDASE NA 184-200
IPR005922 Phenylalanine ammonia-lyase
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006559 L-phenylalanine catabolic process    
Molecular Function GO:0016841 ammonia-lyase activity    
HMMTigr TIGR01226 phe_am_lyase: 6.2e-258 15-516
IPR008948 L-Aspartase-like
Molecular Function GO:0003824 catalytic activity    
superfamily SSF48557 L-aspartase-like 4.5e-155 45-515
no_ID  
Gene3D G3DSA:1.10.275.10 no description 1.2e-66 14-247
Gene3D G3DSA:1.20.200.10 no description 8.5e-95 248-514
Seg seg seg NA 244-257