Jatropha Genome Database

JcCA0131621.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0131621
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9I5B3_POPTR 315 57.0 71.7 (tr|B9I5B3) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_569545 PE=4 SV=1
Arabidopsis_pep AT3G17280.1 82.0 26.9 45.0 | Symbols: | F-box family protein | chr3:5903453-5904613 REVERSE
soybean_pep Glyma09g01330.2 101 30.1 43.1  
Medicago_pep IMGA|Medtr8g147870.1 96.3 29.3 49.2 Cyclin-like F-box; F-box protein interaction domain chr08_pseudomolecule_IMGAG_V3 36488278-36486163 E EGN_Mt090430 20090702
grape_pep GSVIVT01013506001 141 34.7 52.0  
castor_bean_cds 30024.m001744 61.9 78.6 78.6 conserved hypothetical protein
castor_bean_pep 30024.m001744 150 42.2 54.8 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0131621.10 length: 286 aa.
IPR001810 Cyclin-like F-box
method AccNumber shortName E-value location
HMMPfam PF00646 F-box 1e-05 19-56
HMMSmart SM00256 no description 0.00028 19-59
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 0.00019 110-286
no_ID  
superfamily SSF81383 F-box 3.1e-09 7-101