Jatropha Genome Database

JcCA0129501.20 (JcS_103607.70)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0129501
Scaffold:
JcS_103607 JcCA0045831(-) =JcCB0219281(+) =JcCA0129501(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9R971_RICCO 191 47.8 64.7 (tr|B9R971) Zinc finger protein, putative OS=Ricinus communis GN=RCOM_1514560 PE=4 SV=1
Arabidopsis_pep AT1G68180.1 75.9 42.1 62.1 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr1:25554816-25555562 FORWARD
soybean_pep Glyma02g07820.1 74.3 46.6 64.4  
Medicago_pep IMGA|Medtr3g100800.1 85.9 50.6 71.4 Zinc finger, RING-type chr03_pseudomolecule_IMGAG_V3 24279049-24279516 H EGN_Mt090430 20090702
grape_pep GSVIVT01016510001 74.7 40.8 60.6  
castor_bean_cds --No_Hits--        
castor_bean_pep 30147.m014097 191 47.8 64.7 zinc finger protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0129501.20 length: 221 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 no description 3.1e-05 173-213
ProfileScan PS50089 ZF_RING_2 12.224 173-214
IPR011016 Zinc finger, RING-CH-type
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00744 no description 0.0081 172-214
IPR018957 Zinc finger, C3HC4 RING-type
HMMPfam PF00097 zf-C3HC4 6.1e-07 173-213
no_ID  
Gene3D G3DSA:3.30.40.10 no description 4.6e-11 166-219
HMMPanther PTHR22763 RING 5.2e-19 114-219
superfamily SSF57850 RING/U-box 2.8e-14 148-217