Jatropha Genome Database

JcCA0127891.10  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0127891
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl A5BSJ3_VITVI 291 65.5 80.4 (tr|A5BSJ3) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008285 PE=4 SV=1
Arabidopsis_pep --No_Hits--        
soybean_pep Glyma08g41350.1 264 62.9 76.3  
Medicago_pep IMGA|Medtr2g021830.1 191 71.9 81.8 RNA-directed DNA polymerase (Reverse transcriptase) chr02_pseudomolecule_IMGAG_V3 5672480-5674573 E EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0127891.10 length: 204 aa.
IPR000477 RNA-directed DNA polymerase (reverse transcriptase)
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003964 RNA-directed DNA polymerase activity    
Biological Process GO:0006278 RNA-dependent DNA replication    
HMMPfam PF00078 RVT_1 2.7e-06 96-198
no_ID  
Gene3D G3DSA:3.10.10.10 no description 2.1e-07 46-115
HMMPanther PTHR10178 GAG/POL/ENV 6.9e-69 22-204
HMMPanther PTHR10178:SF14 RETROVIRUS 6.9e-69 22-204
superfamily SSF56672 DNA/RNA 2e-60 38-204