| JcS_104549 | JcCB0329751(+) =JcCA0122941(+) =JcCD0051804(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9S8B9_RICCO | 410 | 80.6 | 87.2 | (tr|B9S8B9) Wd40 protein, putative OS=Ricinus communis GN=RCOM_1250300 PE=4 SV=1 |
| Arabidopsis_pep | AT5G45760.1 | 307 | 62.0 | 77.6 | | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:18561121-18563005 FORWARD |
| soybean_pep | Glyma05g29250.1 | 284 | 62.7 | 78.2 | |
| Medicago_pep | IMGA|Medtr4g135000.1 | 294 | 59.9 | 75.2 | transducin family protein, putative chr04_pseudomolecule_IMGAG_V3 32661631-32657267 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01021249001 | 352 | 70.0 | 81.4 | |
| castor_bean_cds | 30026.m001452 | 460 | 83.2 | 83.2 | wd40 protein, putative |
| castor_bean_pep | 30026.m001452 | 410 | 80.6 | 87.2 | wd40 protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCA0122941.10 | length: 251 aa. | |||
| IPR001680 | WD40 repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMSmart | SM00320 | no description | 1.8e+02 | 14-55 154-196 210-249 |
| IPR011046 | WD40 repeat-like-containing domain | |||
| superfamily | SSF50978 | WD40 | 7.9e-23 | 6-250 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | |||
| Gene3D | G3DSA:2.130.10.10 | no description | 2.5e-17 | 7-250 |
| IPR017986 | WD40-repeat-containing domain | |||
| ProfileScan | PS50294 | WD_REPEATS_REGION | 10.232 | 22-64 161-196 |
| IPR019775 | WD40 repeat, conserved site | |||
| PatternScan | PS00678 | WD_REPEATS_1 | NA | 42-56 183-197 |
| IPR019781 | WD40 repeat, subgroup | |||
| HMMPfam | PF00400 | WD40 | 2.1e-09 | 22-55 159-196 |
| IPR019782 | WD40 repeat 2 | |||
| ProfileScan | PS50082 | WD_REPEATS_2 | 12.280 | 22-64 161-196 |
| no_ID | ||||
| HMMPanther | PTHR22847 | WD40 | 1.2e-05 | 7-56 |
| HMMPanther | PTHR22847:SF44 | WD40 | 1.2e-05 | 7-56 |