Jatropha Genome Database

JcCA0122021.20 (JcS_101394.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0122021
Scaffold:
JcS_101394 JcCB0803121(+) =JcCB0001101(+) =JcCD0050496(-) =JcCA0122021(+) =JcCB0035061(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9I6F2_POPTR 77.8 50.0 52.1 (tr|B9I6F2) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_730132 PE=4 SV=1
Arabidopsis_pep AT3G03590.1 58.9 65.0 77.5 | Symbols: | SWIB complex BAF60b domain-containing protein | chr3:865341-866669 REVERSE
soybean_pep Glyma11g09580.1 58.5 65.9 75.6  
Medicago_pep IMGA|Medtr5g005000.1 52.8 53.7 75.6 SWIB/MDM2 chr05_pseudomolecule_IMGAG_V3 4191-3249 E EGN_Mt090430 20090702
grape_pep GSVIVT01019325001 66.6 71.1 77.8  
castor_bean_cds --No_Hits--        
castor_bean_pep 30148.m001413 67.8 68.8 81.2 brg-1 associated factor, putative
JAT_13201ests gi|268525572|gb|FM890827.1|FM890827 416 100.0 100.0 FM890827 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000773, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0122021.20 length: 96 aa.
IPR003121 SWIB/MDM2 domain
method AccNumber shortName E-value location
Gene3D G3DSA:1.10.245.10 no description 7.2e-06 48-93
HMMPfam PF02201 SWIB 4.5e-09 56-93
superfamily SSF47592 SWIB/MDM2 7.1e-10 46-93
no_ID  
Seg seg seg NA 17-46