Jatropha Genome Database

JcCA0120961.10 (JcS_100420.10)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0120961
Scaffold:
JcS_100420 JcCA0232451(+) =JcCA0120961(+) =JcCA0242131(-) =JcCA0080281(+) =JcCB0292741(-) =JcCB0238051(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl Q9SA17_ARATH 109 39.0 54.1 (tr|Q9SA17) F28K20.17 protein OS=Arabidopsis thaliana GN=F28K20.17 PE=4 SV=1
Arabidopsis_pep ATMG00820.1 67.8 41.0 52.4 | Symbols: ORF170 | hypothetical protein | chrM:228573-229085 REVERSE
soybean_pep Glyma16g09250.1 100 38.1 56.8  
Medicago_pep IMGA|CU179634_24.1 75.1 47.4 62.8 Polynucleotidyl transferase, Ribonuclease H fold CU179634.6 87152-89450 H EGN_Mt090430 20090702
grape_pep GSVIVT01017026001 81.6 35.2 50.0  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0120961.10 length: 584 aa.
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
method AccNumber shortName E-value location
HMMPfam PF07727 RVT_2 1.4e-07 540-584
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 2.4e-16 145-580
Seg seg seg NA 40-61
83-99
414-425