Jatropha Genome Database

JcCA0118311.10 (JcS_106121.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0118311
Scaffold:
JcS_106121 JcCA0118311(+) =JcCB0493501(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RS11_RICCO 171 77.6 87.9 (tr|B9RS11) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0801600 PE=4 SV=1
Arabidopsis_pep AT3G16500.1 126 56.7 76.0 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1); transcription factor | chr3:5612801-5614208 REVERSE
soybean_pep Glyma15g02350.2 140 67.3 77.9  
Medicago_pep IMGA|Medtr2g122050.1 127 61.9 76.2 AUX/IAA protein chr02_pseudomolecule_IMGAG_V3 29123619-29119970 E EGN_Mt090430 20090702
grape_pep GSVIVT01016972001 134 66.0 77.7  
castor_bean_cds 29794.m003410 248 85.5 85.5 conserved hypothetical protein
castor_bean_pep 29794.m003410 171 77.6 87.9 conserved hypothetical protein
JAT_13201ests gi|262090512|gb|GT228870.1|GT228870 212 98.4 98.4 JC435 Jatropha seeds from fruits at three stages of maturation Jatropha curcas cDNA clone PL09SE.H03.scf 5', mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0118311.10 length: 205 aa.
IPR011525 Aux/IAA-ARF-dimerisation
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
ProfileScan PS50962 IAA_ARF 26.970 94-199
no_ID  
HMMPfam PF02309 AUX_IAA 1.1e-29 100-201
Seg seg seg NA 52-62
79-98