Jatropha Genome Database

JcCA0117501.10 (JcS_100204.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0117501
Scaffold:
JcS_100204 JcCA0117501(-) =JcCB0016411(-) =JHS12F24f(+) =JcCA0043471(+) =JcCB0321931(-) =JcCA0133521(+) =JcCB0838301(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl D7TKK5_VITVI 179 97.7 100.0 (tr|D7TKK5) Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021666001 PE=4 SV=1
Arabidopsis_pep AT1G30580.1 170 88.4 90.7 | Symbols: | GTP binding | chr1:10831953-10835454 REVERSE
soybean_pep Glyma15g13830.1 175 94.2 100.0  
Medicago_pep IMGA|Medtr2g129790.1 172 91.9 98.8 TGS; GTP1/OBG chr02_pseudomolecule_IMGAG_V3 31477168-31486032 E EGN_Mt090430 20090702
grape_pep GSVIVT01021666001 179 97.7 100.0  
castor_bean_cds 30075.m001173 236 86.5 86.5 GTP-dependent nucleic acid-binding protein engD, putative
castor_bean_pep 30075.m001173 178 97.7 100.0 GTP-dependent nucleic acid-binding protein engD, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c03265 509 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0117501.10 length: 100 aa.
IPR006073 GTP1/OBG
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00326 GTP1OBG 3.8e-13 27-47
48-66
IPR011619 Ferrous iron transport protein B, N-terminal
Molecular Function GO:0005525 GTP binding    
Molecular Function GO:0015093 ferrous iron transmembrane transporter activity    
Biological Process GO:0015684 ferrous iron transport    
Cellular Component GO:0016021 integral to membrane    
HMMPfam PF02421 FeoB_N 1.1e-08 26-73
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.3e-20 23-93
HMMPanther PTHR23305 GTP-BINDING 8.2e-52 2-86
HMMPanther PTHR23305:SF3 GTP-BINDING 8.2e-52 2-86
superfamily SSF52540 P-loop 8.5e-23 15-86