Jatropha Genome Database

JcCA0117331.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0117331
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9H718_POPTR 214 71.5 80.1 (tr|B9H718) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_559084 PE=4 SV=1
Arabidopsis_pep AT5G23960.1 150 50.0 67.1 | Symbols: ATTPS21, TPS21 | TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene synthase/ alpha-humulene synthase | chr5:8092969-8095128 FORWARD
soybean_pep Glyma12g16990.1 152 50.3 69.5  
Medicago_pep IMGA|Medtr5g102000.1 162 52.6 67.8 Terpene synthase-like; Terpenoid synthase chr05_pseudomolecule_IMGAG_V3 40860219-40858716 E EGN_Mt090430 20090702
grape_pep GSVIVT01014569001 171 54.7 74.0  
castor_bean_cds 30169.m006314 67.9 87.1 87.1 Casbene synthase, chloroplast precursor, putative
castor_bean_pep 30169.m006314 202 62.7 78.3 Casbene synthase, chloroplast precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0117331.10 length: 390 aa.
IPR001906 Terpene synthase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF01397 Terpene_synth 1.9e-21 1-72
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 2.7e-21 102-151
245-334
IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 1.4e-30 1-97
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 1.2e-37 113-152
245-388
superfamily SSF48576 Terpenoid 3.6e-62 98-388
no_ID  
Gene3D G3DSA:1.50.30.10 no description 1e-32 1-112