Jatropha Genome Database

JcCA0117111.10 (JcS_102908.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0117111
Scaffold:
JcS_102908 JcCA0117111(+) =JcCA0309141(+) =JcCB0177611(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S6S8_RICCO 113 70.8 81.9 (tr|B9S6S8) AMP dependent ligase, putative OS=Ricinus communis GN=RCOM_0873320 PE=4 SV=1
Arabidopsis_pep AT1G20560.1 95.1 60.3 80.9 | Symbols: AAE1 | AAE1 (ACYL ACTIVATING ENZYME 1); AMP binding | chr1:7119927-7121730 REVERSE
soybean_pep Glyma02g04790.1 105 67.1 81.4  
Medicago_pep IMGA|Medtr8g088410.1 103 65.7 82.9 AMP-dependent synthetase and ligase chr08_pseudomolecule_IMGAG_V3 18721448-18724601 E EGN_Mt090430 20090702
grape_pep GSVIVT01003829001 102 70.1 82.1  
castor_bean_cds 29830.m001428 71.9 79.5 79.5 AMP dependent ligase, putative
castor_bean_pep 29830.m001426 113 70.8 81.9 AMP dependent ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0117111.10 length: 112 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.40.50.980 no description 2.7e-07 11-67
HMMPanther PTHR11968 ATP-DEPENDENT 2.1e-29 3-68
HMMPanther PTHR11968:SF26 ADENOSINE 2.1e-29 3-68
Seg seg seg NA 73-85
superfamily SSF56801 Acetyl-CoA 2.9e-08 9-67