Jatropha Genome Database

JcCA0116311.10 (JcS_106099.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0116311
Scaffold:
JcS_106099 JcCA0116311(+) =JcCB0432541(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9HNV8_POPTR 583 81.0 87.1 (tr|B9HNV8) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1087966 PE=4 SV=1
Arabidopsis_pep AT4G14700.1 489 67.4 80.2 | Symbols: ATORC1A, ORC1A | ORC1A (ORIGIN RECOGNITION COMPLEX 1); DNA binding / double-stranded methylated DNA binding | chr4:8422236-8424665 FORWARD
soybean_pep Glyma15g03900.1 558 77.3 86.3  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01025457001 521 73.1 82.1  
castor_bean_cds 30169.m006435 1066 87.6 87.6 origin recognition complex subunit, putative
castor_bean_pep 30169.m006435 578 82.1 87.1 origin recognition complex subunit, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0116311.10 length: 364 aa.
IPR001025 Bromo adjacent homology (BAH) domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
HMMPfam PF01426 BAH 3.8e-05 2-43
ProfileScan PS51038 BAH 9.348 1-44
IPR003593 ATPase, AAA+ type, core
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 no description 2.8e-07 168-321
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 1.5e-19 173-316
IPR020793 Origin recognition complex, subunit 1
Cellular Component GO:0000808 origin recognition complex    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006260 DNA replication    
HMMPanther PTHR10763:SF6 ORIGIN 1.3e-125 127-356
no_ID  
Gene3D G3DSA:3.40.50.300 no description 7.1e-29 144-324
HMMPanther PTHR10763 ORIGIN 1.3e-125 127-356
Seg seg seg NA 50-61
124-140
superfamily SSF52540 P-loop 7e-30 127-355