Jatropha Genome Database

JcCA0101011.10 (JcS_100388.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0101011
Scaffold:
JcS_100388 JcCA0101011(+) =JcCB0371021(-) =JcCB0104191(+) =JcCA0143421(-) =JcCA0306451(+) =JcCB0424111(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9HWZ5_POPTR 339 60.8 78.3 (tr|B9HWZ5) GRAS family transcription factor OS=Populus trichocarpa GN=GRAS79 PE=4 SV=1
Arabidopsis_pep AT3G03450.1 145 31.9 52.3 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); transcription factor | chr3:819636-821279 REVERSE
soybean_pep Glyma15g15110.1 236 45.7 65.9  
Medicago_pep IMGA|Medtr2g038340.1 254 48.7 69.0 GRAS transcription factor chr02_pseudomolecule_IMGAG_V3 10716759-10714211 E EGN_Mt090430 20090702
grape_pep GSVIVT01028126001 234 48.5 69.6  
castor_bean_cds 29889.m003281 75.8 86.6 86.6 DELLA protein GAI1, putative
castor_bean_pep 29889.m003281 333 60.2 77.4 DELLA protein GAI1, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0101011.10 length: 281 aa.
IPR005202 Transcription factor GRAS
method AccNumber shortName E-value location
HMMPfam PF03514 GRAS 3.2e-54 2-257
ProfileScan PS50985 GRAS 25.139 1-236
no_ID  
Seg seg seg NA 264-275