Jatropha Genome Database

JcCA0091211.10 (JcS_108941.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0091211
Scaffold:
JcS_108941 JcCB0215961(-) =JcCA0091211(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RG29_RICCO 290 91.1 93.0 (tr|B9RG29) DNA replication licensing factor MCM2, putative OS=Ricinus communis GN=RCOM_1438760 PE=3 SV=1
Arabidopsis_pep AT1G44900.1 271 84.1 91.7 | Symbols: MCM2 | ATP binding / DNA binding / DNA-dependent ATPase | chr1:16970291-16974457 FORWARD
soybean_pep Glyma17g03920.1 279 86.6 91.7  
Medicago_pep IMGA|Medtr8g137340.1 280 86.6 91.7 MCM; Nucleic acid-binding, OB-fold, subgroup chr08_pseudomolecule_IMGAG_V3 32903343-32908349 E EGN_Mt090430 20090702
grape_pep GSVIVT01001119001 287 89.2 93.0  
castor_bean_cds 30128.m008586 702 88.0 88.0 DNA replication licensing factor MCM2, putative
castor_bean_pep 30128.m008586 290 91.1 93.0 DNA replication licensing factor MCM2, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0091211.10 length: 234 aa.
IPR001208 DNA-dependent ATPase MCM
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006260 DNA replication    
HMMPfam PF00493 MCM 1.9e-17 162-228
HMMSmart SM00350 no description 8.1e-12 6-234
ProfileScan PS50051 MCM_2 17.251 175-234
IPR008045 MCM protein 2
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006270 DNA replication initiation    
FPrintScan PR01658 MCMPROTEIN2 3.7e-07 124-135
139-150
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 1.3e-11 11-143
IPR016027 Nucleic acid-binding, OB-fold-like
superfamily SSF50249 Nucleic 1.1e-22 73-144
no_ID  
HMMPanther PTHR11630 DNA 7.4e-86 73-225
HMMPanther PTHR11630:SF44 DNA 7.4e-86 73-225