| JcS_100966 | JcCA0090671(+) =JcCB0001721(-) =JcCA0314231(-) =JcCB0280511(+) =JcCA0132941(+) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9RVL8_RICCO | 180 | 95.5 | 98.9 | (tr|B9RVL8) Angio-associated migratory cell protein, putative OS=Ricinus communis GN=RCOM_0964760 PE=4 SV=1 |
| Arabidopsis_pep | AT5G52820.1 | 170 | 84.1 | 98.9 | | Symbols: | WD-40 repeat family protein / notchless protein, putative | chr5:21401423-21404203 FORWARD |
| soybean_pep | Glyma16g27980.1 | 181 | 94.3 | 100.0 | |
| Medicago_pep | IMGA|Medtr3g138220.1 | 53.1 | 33.3 | 52.9 | Lissencephaly type-1-like homology motif; WD40 associated region in TFIID subunit; WD40-like; chr03_pseudomolecule_IMGAG_V3 35308512-35298876 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01032166001 | 178 | 92.0 | 98.9 | |
| castor_bean_cds | 29864.m001463 | 321 | 90.5 | 90.5 | Angio-associated migratory cell protein, putative |
| castor_bean_pep | 29864.m001463 | 180 | 95.5 | 98.9 | Angio-associated migratory cell protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCA0090671.10 | length: 119 aa. | |||
| IPR001680 | WD40 repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMSmart | SM00320 | no description | 4e-09 | 1-36 39-77 |
| IPR011046 | WD40 repeat-like-containing domain | |||
| superfamily | SSF50978 | WD40 | 2.8e-19 | 1-88 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | |||
| Gene3D | G3DSA:2.130.10.10 | no description | 2.2e-17 | 1-88 |
| IPR017986 | WD40-repeat-containing domain | |||
| ProfileScan | PS50294 | WD_REPEATS_REGION | 19.169 | 1-86 |
| IPR019775 | WD40 repeat, conserved site | |||
| PatternScan | PS00678 | WD_REPEATS_1 | NA | 64-78 |
| IPR019781 | WD40 repeat, subgroup | |||
| HMMPfam | PF00400 | WD40 | 5.5e-11 | 1-36 41-77 |
| IPR019782 | WD40 repeat 2 | |||
| ProfileScan | PS50082 | WD_REPEATS_2 | 12.915 | 1-38 46-86 |
| no_ID | ||||
| HMMPanther | PTHR19848 | WD40 | 5e-42 | 1-88 |