Jatropha Genome Database

JcCA0088981.10 (JcS_103730.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0088981
Scaffold:
JcS_103730 JcCA0088981(-) =JcCB0009541(-) =JcCA0276801(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RA25_RICCO 137 65.1 72.6 (tr|B9RA25) Superoxide dismutase OS=Ricinus communis GN=RCOM_1502890 PE=3 SV=1
Arabidopsis_pep AT5G51100.1 116 55.7 66.0 | Symbols: FSD2 | FSD2 (FE SUPEROXIDE DISMUTASE 2); superoxide dismutase | chr5:20773357-20775635 REVERSE
soybean_pep Glyma10g33710.1 110 83.9 91.9  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01013850001 122 58.7 68.8  
castor_bean_cds 30147.m014368 240 89.7 89.7 superoxide dismutase [fe], putative
castor_bean_pep 30147.m014368 137 65.1 72.6 superoxide dismutase [fe], putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0088981.10 length: 117 aa.
IPR001189 Manganese/iron superoxide dismutase
method AccNumber shortName E-value location
Molecular Function GO:0004784 superoxide dismutase activity    
Biological Process GO:0006801 superoxide metabolic process    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation reduction    
HMMPanther PTHR11404 SUPEROXIDE 4.9e-37 5-76
IPR019832 Manganese/iron superoxide dismutase, C-terminal
Molecular Function GO:0004784 superoxide dismutase activity    
Biological Process GO:0006801 superoxide metabolic process    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation reduction    
HMMPfam PF02777 Sod_Fe_C 3.2e-22 4-71
superfamily SSF54719 Fe,Mn 4.7e-21 4-87
IPR019833 Manganese/iron superoxide dismutase, binding site
Molecular Function GO:0004784 superoxide dismutase activity    
Biological Process GO:0006801 superoxide metabolic process    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation reduction    
PatternScan PS00088 SOD_MN NA 37-44
no_ID  
Coil coil coiled-coil NA 69-98
HMMPanther PTHR11404:SF8 SUPEROXIDE 4.9e-37 5-76
Seg seg seg NA 73-95