Jatropha Genome Database

JcCA0088501.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0088501
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9IQS5_POPTR 179 88.4 95.8 (tr|B9IQS5) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_913328 PE=4 SV=1
Arabidopsis_pep AT4G19170.1 167 82.1 89.5 | Symbols: NCED4 | NCED4 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4) | chr4:10481835-10483622 FORWARD
soybean_pep Glyma01g35910.1 145 75.3 86.0  
Medicago_pep IMGA|Medtr5g025290.1 138 79.3 83.9 Carotenoid oxygenase chr05_pseudomolecule_IMGAG_V3 10116366-10118405 E EGN_Mt090430 20090702
grape_pep GSVIVT01024318001 128 63.7 82.4  
castor_bean_cds 29827.m002661 131 82.4 82.4 9-cis-epoxycarotenoid dioxygenase, putative
castor_bean_pep 29827.m002661 171 82.1 95.8 9-cis-epoxycarotenoid dioxygenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0088501.10 length: 96 aa.
IPR004294 Carotenoid oxygenase
method AccNumber shortName E-value location
HMMPanther PTHR10543 CARTENOID 3e-30 12-90
HMMPfam PF03055 RPE65 4.4e-26 12-88
no_ID  
HMMPanther PTHR10543:SF1 9-CIS-EPOXYCAROTENOID 3e-30 12-90