Jatropha Genome Database

JcCA0087501.20 (JcS_110386.30)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0087501
Scaffold:
JcS_110386 JcCB0047811(-) =JcCA0087501(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q84KB0_CUCME 259 57.5 77.5 (tr|Q84KB0) Pol protein OS=Cucumis melo PE=4 SV=1
Arabidopsis_pep --No_Hits--        
soybean_pep Glyma01g20680.1 216 50.0 69.2  
Medicago_pep IMGA|AC229695_24.1 92.8 35.2 52.5 Chromo AC229695.5 111963-111064 H EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0087501.20 length: 207 aa.
IPR000953 Chromo domain
method AccNumber shortName E-value location
Cellular Component GO:0000785 chromatin    
Molecular Function GO:0003682 chromatin binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006333 chromatin assembly or disassembly    
HMMPfam PF00385 Chromo 1.9e-09 150-197
no_ID  
Coil coil coiled-coil NA 25-46
HMMPanther PTHR10178 GAG/POL/ENV 1.5e-54 1-198
HMMPanther PTHR10178:SF14 RETROVIRUS 1.5e-54 1-198
Seg seg seg NA 23-38