Jatropha Genome Database

JcCA0081161.30 (JcS_102155.30)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0081161
Scaffold:
JcS_102155 JcCB0281131(-) =JcCA0081161(+) =JcCB0224861(-) =JcCA0268691(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A2Q168_MEDTR 104 36.2 56.6 (tr|A2Q168) RNA-directed DNA polymerase (Reverse transcriptase) (Fragment) OS=Medicago truncatula GN=MtrDRAFT_AC148290g28v2 PE=4 SV=1
Arabidopsis_pep --No_Hits--        
soybean_pep --No_Hits--        
Medicago_pep IMGA|Medtr2g005080.1 88.6 35.5 52.0 RNA-directed DNA polymerase (Reverse transcriptase) chr02_pseudomolecule_IMGAG_V3 86385-88912 E EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds --No_Hits--        
castor_bean_pep 30061.m000297 67.8 37.7 55.7 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0081161.30 length: 672 aa.
IPR015706 RNA-directed DNA polymerase (reverse transcriptase), related
method AccNumber shortName E-value location
HMMPanther PTHR19446 REVERSE 8e-15 9-142
no_ID  
HMMPanther PTHR19446:SF34 NON-LTR 8e-15 9-142
Seg seg seg NA 229-245
354-372