Jatropha Genome Database

JcCA0080871.20 (JcS_102744.20)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0080871
Scaffold:
JcS_102744 JcSR144095f(+) =JcCA0080871(+) =JcCB0061321(-) =JcCB0889381(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5AUE6_VITVI 763 64.5 78.8 (tr|A5AUE6) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021034 PE=4 SV=1
Arabidopsis_pep AT4G23160.1 294 36.6 56.9 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD
soybean_pep Glyma11g04990.1 721 62.6 76.7  
Medicago_pep IMGA|Medtr4g080020.1 282 36.7 56.9 Polynucleotidyl transferase, Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H EGN_Mt090430 20090702
grape_pep GSVIVT01014104001 166 47.8 62.6  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0080871.20 length: 691 aa.
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
method AccNumber shortName E-value location
HMMPfam PF07727 RVT_2 1.1e-95 217-461
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 5e-213 12-581
Seg seg seg NA 105-116
569-598
superfamily SSF56672 DNA/RNA 3.5e-20 216-636