Jatropha Genome Database

JcCA0080721.20 (JcS_103719.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0080721
Scaffold:
JcS_103719 JcCA0080721(+) =JcCA0147181(-) =JcCB0263761(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9IC82_POPTR 823 71.2 80.3 (tr|B9IC82) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_244302 PE=4 SV=1
Arabidopsis_pep AT1G01920.2 726 65.6 76.2 | Symbols: | SET domain-containing protein | chr1:316204-319507 FORWARD
soybean_pep Glyma18g46250.1 768 65.9 78.0  
Medicago_pep IMGA|Medtr7g084290.1 399 65.8 77.6 Nuclear protein SET; Calcium-binding EF-hand chr07_pseudomolecule_IMGAG_V3 18173599-18177267 H EGN_Mt090430 20090702
grape_pep GSVIVT01026363001 802 69.1 80.8  
castor_bean_cds 30174.m008951 634 85.6 85.6 conserved hypothetical protein
castor_bean_pep 30174.m008951 644 74.4 83.5 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0080721.20 length: 575 aa.
IPR018247 EF-Hand 1, calcium-binding site
method AccNumber shortName E-value location
PatternScan PS00018 EF_HAND_1 NA 164-176
no_ID  
Coil coil coiled-coil NA 481-502
Gene3D G3DSA:3.90.1410.10 no description 4.4e-55 4-331
HMMPanther PTHR13271 UNCHARACTERIZED 7.1e-47 5-363
superfamily SSF82199 SET 3.6e-46 5-335