| JcS_103719 | JcCA0080721(+) =JcCA0147181(-) =JcCB0263761(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9RDJ2_RICCO | 537 | 50.9 | 62.7 | (tr|B9RDJ2) F-box and wd40 domain protein, putative OS=Ricinus communis GN=RCOM_1613520 PE=4 SV=1 |
| Arabidopsis_pep | AT4G25440.1 | 423 | 56.4 | 73.8 | | Symbols: ZFWD1 | ZFWD1 (zinc finger WD40 repeat protein 1); nucleic acid binding / zinc ion binding | chr4:13007107-13009381 REVERSE |
| soybean_pep | Glyma15g19160.1 | 423 | 57.0 | 74.5 | |
| Medicago_pep | IMGA|AC235567_67.1 | 399 | 42.3 | 56.8 | Zinc finger, CCCH-type AC235567.1 251711-249065 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01019135001 | 442 | 48.5 | 63.1 | |
| castor_bean_cds | 30174.m008950 | 168 | 82.1 | 82.1 | F-box and wd40 domain protein, putative |
| castor_bean_pep | 30174.m008950 | 537 | 50.9 | 62.7 | F-box and wd40 domain protein, putative |
| JAT_13201ests | gi|268522445|gb|FM894590.1|FM894590 | 747 | 93.7 | 93.7 | FM894590 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000383, mRNA sequence |
| KJC_r1 | --No_Hits-- |
| JcCA0080721.10 | length: 498 aa. | |||
| IPR000571 | Zinc finger, CCCH-type | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMSmart | SM00356 | no description | 0.0063 | 18-42 167-192 |
| ProfileScan | PS50103 | ZF_C3H1 | 12.803 | 17-43 166-193 |
| IPR001680 | WD40 repeat | |||
| HMMSmart | SM00320 | no description | 90 | 197-236 276-313 322-359 362-399 405-446 449-486 |
| IPR011046 | WD40 repeat-like-containing domain | |||
| superfamily | SSF50978 | WD40 | 1.1e-44 | 200-486 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | |||
| Gene3D | G3DSA:2.130.10.10 | no description | 7e-38 | 198-485 |
| IPR017986 | WD40-repeat-containing domain | |||
| ProfileScan | PS50294 | WD_REPEATS_REGION | 23.176 | 204-455 |
| IPR019775 | WD40 repeat, conserved site | |||
| PatternScan | PS00678 | WD_REPEATS_1 | NA | 223-237 346-360 |
| IPR019781 | WD40 repeat, subgroup | |||
| HMMPfam | PF00400 | WD40 | 2e-07 | 201-236 327-359 364-398 |
| IPR019782 | WD40 repeat 2 | |||
| ProfileScan | PS50082 | WD_REPEATS_2 | 9.038 | 204-245 329-368 369-398 |
| IPR020472 | G-protein beta WD-40 repeat, region | |||
| FPrintScan | PR00320 | GPROTEINBRPT | 1.2e-06 | 223-237 346-360 386-400 |
| no_ID | ||||
| HMMPanther | PTHR22844 | F-BOX | 8.6e-29 | 198-447 |