Jatropha Genome Database

JcCA0080501.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0080501
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl C6T3Q6_SOYBN 166 93.8 100.0 (tr|C6T3Q6) Putative uncharacterized protein OS=Glycine max PE=2 SV=1
Arabidopsis_pep AT3G54826.1 145 75.3 88.2 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, Zim17-type (InterPro:IPR007853); Has 284 Blast hits to 284 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 79; Plants - 58; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). | chr3:20310354-20311652 FORWARD
soybean_pep Glyma10g35330.1 167 93.8 100.0  
Medicago_pep IMGA|Medtr1g120530.1 147 77.4 88.1 Zinc finger, Zim17-type chr01_pseudomolecule_IMGAG_V3 25963063-25961122 E EGN_Mt090430 20090702
grape_pep GSVIVT01016242001 127 87.1 93.5  
castor_bean_cds 29595.m000284 218 86.0 86.0 conserved hypothetical protein
castor_bean_pep 29595.m000284 163 90.4 95.2 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0080501.10 length: 85 aa.
IPR007853 Zinc finger, Zim17-type
method AccNumber shortName E-value location
HMMPanther PTHR20922 UNCHARACTERIZED 6.3e-27 8-85
HMMPfam PF05180 zf-DNL 1.9e-25 1-63
no_ID  
HMMPanther PTHR20922:SF13 UNCHARACTERIZED 6.3e-27 8-85