Jatropha Genome Database

JcCA0079711.10 (JcS_100357.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0079711
Scaffold:
JcS_100357 JcCB0888501(+) =JcCD0175893(-) =JcCA0079711(-) =JcCB0071481(+) =JcCB0189041(-) =JcCB0295121(+) =JcCB0451531(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SZ78_RICCO 765 95.7 98.7 (tr|B9SZ78) Dtdp-glucose 4-6-dehydratase, putative OS=Ricinus communis GN=RCOM_0484660 PE=4 SV=1
Arabidopsis_pep AT5G28840.1 722 89.9 95.8 | Symbols: GME | GME (GDP-D-MANNOSE 3',5'-EPIMERASE); GDP-mannose 3,5-epimerase/ NAD or NADH binding / catalytic | chr5:10862472-10864024 REVERSE
soybean_pep Glyma19g43410.1 738 92.0 96.5  
Medicago_pep IMGA|Medtr7g140940.1 730 91.0 95.8 NAD-dependent epimerase/dehydratase chr07_pseudomolecule_IMGAG_V3 34037662-34032320 E EGN_Mt090430 20090702
grape_pep GSVIVT01018081001 521 96.1 98.8  
castor_bean_cds 29598.m000469 1481 91.6 91.6 dtdp-glucose 4-6-dehydratase, putative
castor_bean_pep 29598.m000469 765 95.7 98.7 dtdp-glucose 4-6-dehydratase, putative
JAT_13201ests gi|218687270|gb|GH296537.1|GH296537 490 100.0 100.0 JCL987 Jatropha curcas total leaf library Jatropha curcas cDNA, mRNA sequence
KJC_r1 KJC_c00907 2242 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0079711.10 length: 376 aa.
IPR001509 NAD-dependent epimerase/dehydratase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0044237 cellular metabolic process    
Molecular Function GO:0050662 coenzyme binding    
HMMPfam PF01370 Epimerase 4.8e-44 30-269
IPR016040 NAD(P)-binding domain
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005488 binding    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.720 no description 3.3e-46 25-256
superfamily SSF51735 NAD(P)-binding 5.4e-66 29-336
no_ID  
HMMPanther PTHR10366 NAD 1.4e-130 32-350
HMMPanther PTHR10366:SF35 DTDP-GLUCOSE 1.4e-130 32-350