Jatropha Genome Database

JcCA0079341.20 (JcS_102281.80)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0079341
Scaffold:
JcS_102281 JcCB0384311(+) =JcCB0211161(-) =JcCB0017171(-) =JcCA0079341(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9N673_POPTR 1180 83.6 92.3 (tr|B9N673) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_583125 PE=4 SV=1
Arabidopsis_pep AT1G78570.1 1088 77.7 87.3 | Symbols: RHM1, ROL1, ATRHM1 | RHM1 (RHAMNOSE BIOSYNTHESIS 1); UDP-L-rhamnose synthase/ UDP-glucose 4,6-dehydratase/ catalytic | chr1:29550110-29552207 FORWARD
soybean_pep Glyma14g17880.1 1111 80.2 88.7  
Medicago_pep IMGA|Medtr1g010610.1 1100 79.3 87.6 NAD-dependent epimerase/dehydratase chr01_pseudomolecule_IMGAG_V3 1813470-1815842 E EGN_Mt090430 20090702
grape_pep GSVIVT01033176001 577 80.9 90.6  
castor_bean_cds 29848.m004471 874 85.8 85.8 dtdp-glucose 4,6-dehydratase, putative
castor_bean_pep 29607.m000233 971 72.6 79.4 NAD dependent epimerase/dehydratase, putative
JAT_13201ests gi|268517598|gb|FM889309.1|FM889309 52.0 100.0 100.0 FM889309 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002940, mRNA sequence
KJC_r1 KJC_c00606 113 82.9 82.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0079341.20 length: 655 aa.
IPR001509 NAD-dependent epimerase/dehydratase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0044237 cellular metabolic process    
Molecular Function GO:0050662 coenzyme binding    
HMMPfam PF01370 Epimerase 1.7e-12 13-255
388-526
IPR016040 NAD(P)-binding domain
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005488 binding    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.720 no description 2.5e-18 11-275
371-554
superfamily SSF51735 NAD(P)-binding 6.8e-24 11-350
365-632
no_ID  
HMMPanther PTHR10366 NAD 6e-177 375-648
HMMPanther PTHR10366:SF2 NAD 6e-177 375-648