Jatropha Genome Database

JcCA0079011.10 (JcS_100029.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0079011
Scaffold:
JcS_100029 JcCA0079011(+) =JcCB0224691(+) =JcCB0309421(+) =JcCB0216031(+) =JcCB0293431(+) =JcCB0364041(-) =JcCB0094891(+) =JcCB0201931(-) =JcCA0154801(-) =JcCB0542031(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RGG5_RICCO 541 61.5 71.1 (tr|B9RGG5) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1453980 PE=4 SV=1
Arabidopsis_pep AT5G13460.1 292 49.9 66.0 | Symbols: IQD11 | IQD11 (IQ-domain 11); calmodulin binding | chr5:4316323-4318247 FORWARD
soybean_pep Glyma09g35920.1 404 49.5 62.7  
Medicago_pep IMGA|Medtr4g118520.1 376 46.9 61.8 IQ calmodulin-binding region chr04_pseudomolecule_IMGAG_V3 27758498-27761975 E EGN_Mt090430 20090702
grape_pep GSVIVT01000865001 264 49.2 59.6  
castor_bean_cds 30131.m007254 420 83.9 83.9 conserved hypothetical protein
castor_bean_pep 30131.m007254 541 61.5 71.1 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0079011.10 length: 449 aa.
IPR000048 IQ calmodulin-binding region
method AccNumber shortName E-value location
HMMPfam PF00612 IQ 0.092 129-147
150-167
HMMSmart SM00015 no description 6.7e-05 125-147
ProfileScan PS50096 IQ 7.382 126-154
150-177
no_ID  
Coil coil coiled-coil NA 56-77
Seg seg seg NA 42-54
73-92
122-136
298-312