Jatropha Genome Database

JcCA0078121.10 (JcS_100287.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0078121
Scaffold:
JcS_100287 JcCB0299291(+) =JcCB0040601(+) =JcCB0240711(-) =JcCA0078121(-) =JcCB0460221(+) =JcCB0285141(+) =JcCB0289761(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9HIW5_POPTR 291 82.9 92.1 (tr|B9HIW5) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1084995 PE=4 SV=1
Arabidopsis_pep AT1G13580.2 263 73.8 86.6 | Symbols: LAG13 | LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) | chr1:4645006-4646765 REVERSE
soybean_pep Glyma16g12080.2 276 80.8 91.7  
Medicago_pep IMGA|Medtr4g129740.1 59.3 33.9 49.1 TRAM, LAG1 and CLN8 homology chr04_pseudomolecule_IMGAG_V3 30931961-30926355 E EGN_Mt090430 20090702
grape_pep GSVIVT01010169001 248 74.4 87.2  
castor_bean_cds 36771.m000012 381 91.7 91.7 longevity assurance factor, putative
castor_bean_pep 30174.m009049 241 69.5 80.5 longevity assurance factor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0078121.10 length: 164 aa.
IPR006634 TRAM/LAG1/CLN8 homology domain
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
HMMPfam PF03798 TRAM_LAG1_CLN8 6.3e-09 74-164
ProfileScan PS50922 TLC 11.513 73-164
no_ID  
HMMPanther PTHR12560 LONGEVITY 1.4e-42 1-164