Jatropha Genome Database

JcCA0077561.10 (JcS_104292.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0077561
Scaffold:
JcS_104292 JcCB0237541(+) =JcCA0316111(-) =JcCA0077561(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl D7TCG2_VITVI 359 55.5 64.3 (tr|D7TCG2) Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015095001 PE=4 SV=1
Arabidopsis_pep AT3G13960.1 184 70.5 87.5 | Symbols: AtGRF5 | AtGRF5 (GROWTH-REGULATING FACTOR 5); transcription activator | chr3:4608526-4610160 FORWARD
soybean_pep Glyma09g07990.1 327 52.7 59.3  
Medicago_pep IMGA|Medtr8g024740.1 194 76.8 89.3 AtGRF5, putative chr08_pseudomolecule_IMGAG_V3 4736562-4735415 E EGN_Mt090430 20090702
grape_pep GSVIVT01015095001 359 55.5 64.3  
castor_bean_cds 29739.m003775 450 90.8 90.8 conserved hypothetical protein
castor_bean_pep 29739.m003775 341 75.5 78.3 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0077561.10 length: 455 aa.
IPR014977 WRC
method AccNumber shortName E-value location
HMMPfam PF08879 WRC 2.3e-22 76-119
IPR014978 Glutamine-Leucine-Glutamine, QLQ
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005634 nucleus    
Molecular Function GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides    
Biological Process GO:0045449 regulation of transcription    
HMMPfam PF08880 QLQ 2.2e-16 8-43
no_ID  
Seg seg seg NA 154-165
249-261
273-290