| JcS_100315 | JcCB0469141(+) =JcCA0077051(+) =JcCB0574401(-) =JcCB0086501(+) =JcCB0041131(+) =JcCB0375371(+) =JcCB0281211(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9RWJ4_RICCO | 715 | 93.1 | 95.1 | (tr|B9RWJ4) WD-repeat protein, putative OS=Ricinus communis GN=RCOM_1020200 PE=4 SV=1 |
| Arabidopsis_pep | AT2G32700.6 | 524 | 68.4 | 81.0 | | Symbols: LUH | WD-40 repeat family protein | chr2:13867235-13871844 FORWARD |
| soybean_pep | Glyma10g18620.1 | 626 | 80.1 | 89.3 | |
| Medicago_pep | IMGA|Medtr1g068870.3 | 616 | 79.1 | 87.9 | Lissencephaly type-1-like homology motif; chr01_pseudomolecule_IMGAG_V3 13900361-13886380 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01028646001 | 542 | 68.4 | 81.6 | |
| castor_bean_cds | 29904.m002961 | 1388 | 91.0 | 91.0 | WD-repeat protein, putative |
| castor_bean_pep | 29904.m002961 | 715 | 93.1 | 95.1 | WD-repeat protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCA0077051.10 | length: 407 aa. | |||
| IPR001680 | WD40 repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMSmart | SM00320 | no description | 3.6e+02 | 138-177 180-219 223-263 266-302 305-343 346-382 |
| IPR006692 | Coatomer, WD associated region | |||
| Molecular Function | GO:0005198 | structural molecule activity | ||
| Molecular Function | GO:0005515 | protein binding | ||
| Biological Process | GO:0006886 | intracellular protein transport | ||
| Biological Process | GO:0016192 | vesicle-mediated transport | ||
| Cellular Component | GO:0030117 | membrane coat | ||
| HMMPfam | PF04053 | Coatomer_WDAD | 1.1e-06 | 244-366 |
| IPR011046 | WD40 repeat-like-containing domain | |||
| superfamily | SSF50978 | WD40 | 1.8e-53 | 137-407 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | |||
| Gene3D | G3DSA:2.130.10.10 | no description | 1.6e-51 | 137-407 |
| IPR017986 | WD40-repeat-containing domain | |||
| ProfileScan | PS50294 | WD_REPEATS_REGION | 32.483 | 145-352 |
| IPR019775 | WD40 repeat, conserved site | |||
| PatternScan | PS00678 | WD_REPEATS_1 | NA | 164-178 206-220 |
| IPR019781 | WD40 repeat, subgroup | |||
| HMMPfam | PF00400 | WD40 | 3e-07 | 149-177 188-219 |
| IPR019782 | WD40 repeat 2 | |||
| ProfileScan | PS50082 | WD_REPEATS_2 | 8.838 | 145-186 187-219 230-272 312-352 |
| no_ID | ||||
| HMMPanther | PTHR22847 | WD40 | 1.5e-34 | 144-368 |
| Seg | seg | seg | NA | 19-33 36-50 |