Jatropha Genome Database

JcCA0076481.10 (JcS_100034.80)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0076481
Scaffold:
JcS_100034 JcCB0189361(+) =JcCA0199801(-) =JcCB0216831(+) =JcCA0149441(-) =JcCA0036251(+) =JcCA0047351(-) =JcCA0076481(-) =JcCB0268591(-) =JcCB0646891(-) =JcCA0075411(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A9P9G8_POPTR 471 82.6 89.1 (tr|A9P9G8) Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1
Arabidopsis_pep AT3G47690.1 414 72.7 82.9 | Symbols: ATEB1A, EB1A, ATEB1H2 | ATEB1A; microtubule binding | chr3:17581353-17583346 FORWARD
soybean_pep Glyma17g10720.1 431 77.0 85.4  
Medicago_pep IMGA|Medtr8g112510.1 431 77.6 86.9 Calponin-like actin-binding; EB1 chr08_pseudomolecule_IMGAG_V3 25275245-25279012 E EGN_Mt090430 20090702
grape_pep GSVIVT01020018001 401 73.1 83.7  
castor_bean_cds 30147.m014109 373 86.1 86.1 conserved hypothetical protein
castor_bean_pep 30147.m014109 408 76.4 80.1 conserved hypothetical protein
JAT_13201ests gi|268524744|gb|FM895442.1|FM895442 741 97.6 97.6 FM895442 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002364, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0076481.10 length: 275 aa.
IPR001715 Calponin-like actin-binding
method AccNumber shortName E-value location
Gene3D G3DSA:1.10.418.10 no description 4.7e-46 14-132
HMMPfam PF00307 CH 2.6e-11 16-114
IPR004953 EB1, C-terminal
Molecular Function GO:0008017 microtubule binding    
HMMPfam PF03271 EB1 3.3e-17 208-246
ProfileScan PS51230 EB1_C 16.194 183-253
IPR016146 Calponin-homology
superfamily SSF47576 Calponin-homology 3.7e-41 5-132
no_ID  
Coil coil coiled-coil NA 191-212
HMMPanther PTHR10623 MICROTUBULE-ASSOCIATED 2e-99 21-272
Seg seg seg NA 176-189