Jatropha Genome Database

JcCA0075411.40 (JcS_100034.100)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0075411
Scaffold:
JcS_100034 JcCB0189361(+) =JcCA0199801(-) =JcCB0216831(+) =JcCA0149441(-) =JcCA0036251(+) =JcCA0047351(-) =JcCA0076481(-) =JcCB0268591(-) =JcCB0646891(-) =JcCA0075411(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9NEG2_POPTR 115 94.9 100.0 (tr|B9NEG2) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_294361 PE=4 SV=1
Arabidopsis_pep AT5G15200.1 95.1 84.0 100.0 | Symbols: | 40S ribosomal protein S9 (RPS9B) | chr5:4935124-4936334 REVERSE
soybean_pep Glyma17g10710.1 87.8 97.7 97.7  
Medicago_pep IMGA|AC233662_59.1 86.3 97.6 97.6 RNA-binding S4 AC233662.1 270219-271638 E EGN_Mt090430 20090702
grape_pep GSVIVT01011384001 83.6 92.9 97.6  
castor_bean_cds 30147.m014108 248 93.1 93.1 40S ribosomal protein S9, putative
castor_bean_pep 30147.m014108 103 96.0 100.0 40S ribosomal protein S9, putative
JAT_13201ests gi|268518427|gb|FM888701.1|FM888701 93.7 93.7 93.7 FM888701 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002159, mRNA sequence
KJC_r1 KJC_c00293 357 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0075411.40 length: 59 aa.
IPR001912 Ribosomal protein S4
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0019843 rRNA binding    
HMMPanther PTHR11831 30S 3.9e-30 1-58
no_ID  
HMMPanther PTHR11831:SF3 40S 3.9e-30 1-58