Jatropha Genome Database

JcCA0075411.10 (JcS_100034.130)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0075411
Scaffold:
JcS_100034 JcCB0189361(+) =JcCA0199801(-) =JcCB0216831(+) =JcCA0149441(-) =JcCA0036251(+) =JcCA0047351(-) =JcCA0076481(-) =JcCB0268591(-) =JcCB0646891(-) =JcCA0075411(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9R979_RICCO 1120 79.2 88.3 (tr|B9R979) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1514740 PE=4 SV=1
Arabidopsis_pep AT3G47700.1 867 62.6 78.8 | Symbols: MAG2 | MAG2 (maigo2) | chr3:17583773-17586578 REVERSE
soybean_pep Glyma04g25590.1 983 70.5 83.9  
Medicago_pep IMGA|Medtr7g065190.1 934 67.4 83.4 Lipocalin; RINT-1/TIP-1 chr07_pseudomolecule_IMGAG_V3 13363728-13360863 E EGN_Mt090430 20090702
grape_pep GSVIVT01008031001 506 59.1 70.0  
castor_bean_cds 30147.m014105 1586 84.9 84.9 conserved hypothetical protein
castor_bean_pep 30147.m014105 1120 79.2 88.3 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0075411.10 length: 679 aa.
IPR007528 RINT-1/TIP-1
method AccNumber shortName E-value location
HMMPfam PF04437 RINT1_TIP1 1.2e-134 179-676
ProfileScan PS51386 RINT1_TIP20 125.876 87-679
no_ID  
HMMPanther PTHR13520 RAD50-INTERACTING 7e-96 13-678