Jatropha Genome Database

JcCA0074091.20  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0074091
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9IJD7_POPTR 279 78.2 87.4 (tr|B9IJD7) White-brown-complex ABC transporter family (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_258333 PE=4 SV=1
Arabidopsis_pep AT1G17840.1 199 52.4 70.7 | Symbols: WBC11, ABCG11, DSO, COF1, ATWBC11 | WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11); ATPase, coupled to transmembrane movement of substances / fatty acid transporter | chr1:6142870-6145894 FORWARD
soybean_pep Glyma08g07570.1 270 67.4 82.4  
Medicago_pep IMGA|Medtr4g120740.1 275 67.8 82.9 AAA ATPase chr04_pseudomolecule_IMGAG_V3 28121007-28114273 E EGN_Mt090430 20090702
grape_pep GSVIVT01015767001 278 69.9 82.9  
castor_bean_cds 29806.m000948 151 82.7 82.7 ATP-binding cassette transporter, putative
castor_bean_pep 29772.m000319 272 67.5 82.2 ATP-binding cassette transporter, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0074091.20 length: 253 aa.
IPR003439 ABC transporter-like
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 3.4e-15 100-227
ProfileScan PS50893 ABC_TRANSPORTER_2 10.371 56-252
IPR003593 ATPase, AAA+ type, core
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 no description 0.00019 85-247
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 199-213
no_ID  
Gene3D G3DSA:3.40.50.300 no description 4.1e-29 63-246
HMMPanther PTHR19241 ATP-BINDING 9.8e-82 56-246
HMMPanther PTHR19241:SF20 ATP-BINDING 9.8e-82 56-246
Seg seg seg NA 192-202
superfamily SSF52540 P-loop 4.8e-37 56-246