Jatropha Genome Database

JcCA0071791.10 (JcS_100080.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0071791
Scaffold:
JcS_100080 JcCB0397941(+) =JcCA0131871(-) =JcCD0145641(-) =JcCA0071791(-) =JcCA0310021(-) =JcCB0126391(+) =JcCB0072271(-) =JcCB0455001(-) =JcCB0575231(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RN30_RICCO 493 61.0 71.5 (tr|B9RN30) Protein CHMP7, putative OS=Ricinus communis GN=RCOM_1343110 PE=4 SV=1
Arabidopsis_pep AT3G62080.2 314 48.6 66.3 | Symbols: | SNF7 family protein | chr3:22986191-22988517 FORWARD
soybean_pep Glyma19g40990.1 239 43.2 58.3  
Medicago_pep IMGA|Medtr7g134220.1 347 51.7 69.1 Snf7 chr07_pseudomolecule_IMGAG_V3 31634844-31630396 H EGN_Mt090430 20090702
grape_pep GSVIVT01028237001 412 53.1 66.1  
castor_bean_cds 30076.m004541 533 86.8 86.8 Protein CHMP7, putative
castor_bean_pep 30076.m004541 493 61.0 71.5 Protein CHMP7, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0071791.10 length: 407 aa.
IPR005024 Snf7
method AccNumber shortName E-value location
Biological Process GO:0015031 protein transport    
HMMPfam PF03357 Snf7 6.6e-18 202-354
no_ID  
Coil coil coiled-coil NA 302-323
HMMPanther PTHR22761 SNF7 6.1e-26 198-339
Seg seg seg NA 295-307
328-336