Jatropha Genome Database

JcCA0070351.20  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0070351
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q6L3N8_SOLDE 517 57.9 73.3 (tr|Q6L3N8) Putative gag-pol polyprotein, identical OS=Solanum demissum GN=SDM1_42t00010 PE=4 SV=1
Arabidopsis_pep AT3G21000.1 110 26.0 42.9 | Symbols: | unknown protein | chr3:7363921-7365138 FORWARD
soybean_pep Glyma07g34840.1 301 39.0 57.1  
Medicago_pep IMGA|Medtr1g102740.1 89.0 35.3 57.8 gag-pol polyprotein, related chr01_pseudomolecule_IMGAG_V3 21153367-21155226 E EGN_Mt090430 20090702
grape_pep GSVIVT01028612001 218 34.5 50.6  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0070351.20 length: 443 aa.
IPR001878 Zinc finger, CCHC-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50158 ZF_CCHC 8.812 261-275
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 1.1e-36 14-417
Seg seg seg NA 225-250