Jatropha Genome Database

JcCA0066941.10 (JcS_100001.120)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0066941
Scaffold:
JcS_100001 JcCB0130751(-) =JcCA0312871(-) =JcCB0287701(+) =JcCB0171671(-) =JcCA0315721(-) =JcCB0186361(+) =JcCA0066941(+) =JcCA0264441(-) =JcPR10F8MCI(+) =JcCA0277701(-) =JcCB0465311(+) =JcCC0332622(+) =JcCB0455701(-) =JcCB0698151(+) =JcCB0545461(+) =JcCA0316711(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl D7TPD1_VITVI 368 93.1 97.4 (tr|D7TPD1) Whole genome shotgun sequence of line PN40024, scaffold_104.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011104001 PE=4 SV=1
Arabidopsis_pep AT1G03270.1 355 89.4 95.8 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14240.1); Has 6515 Blast hits to 6357 proteins in 1347 species: Archae - 64; Bacteria - 4189; Metazoa - 291; Fungi - 188; Plants - 123; Viruses - 0; Other Eukaryotes - 1660 (source: NCBI BLink). | chr1:799191-802436 FORWARD
soybean_pep Glyma19g33660.1 350 90.5 94.7  
Medicago_pep IMGA|Medtr7g010120.1 276 73.0 83.6 CBS chr07_pseudomolecule_IMGAG_V3 2120338-2124503 E EGN_Mt090430 20090702
grape_pep GSVIVT01011104001 368 93.1 97.4  
castor_bean_cds 28153.m000279 593 88.2 88.2 conserved hypothetical protein
castor_bean_pep 28153.m000279 367 94.2 96.8 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c07975 137 79.1 79.1  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0066941.10 length: 189 aa.
IPR002550 Protein of unknown function DUF21
method AccNumber shortName E-value location
HMMPfam PF01595 DUF21 1e-26 2-143
no_ID  
HMMPanther PTHR12064 ANCIENT 9.4e-108 1-189
HMMPanther PTHR12064:SF2 UNCHARACTERIZED 9.4e-108 1-189