Jatropha Genome Database

JcCA0066751.10 (JcS_103524.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0066751
Scaffold:
JcS_103524 JcCA0308281(+) =JcCA0249211(+) =JcCA0066751(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SGZ2_RICCO 165 51.1 64.7 (tr|B9SGZ2) Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0579380 PE=4 SV=1
Arabidopsis_pep AT3G49930.1 132 46.6 58.0 | Symbols: | zinc finger (C2H2 type) family protein | chr3:18510246-18510893 FORWARD
soybean_pep Glyma17g35430.1 141 44.7 57.4  
Medicago_pep IMGA|Medtr1g135260.1 137 46.9 58.8 Zinc finger, C2H2-type chr01_pseudomolecule_IMGAG_V3 30191745-30192834 E EGN_Mt090430 20090702
grape_pep GSVIVT01012197001 85.5 34.0 52.5  
castor_bean_cds 29661.m000908 117 91.2 91.2 zinc finger protein, putative
castor_bean_pep 29661.m000908 165 51.1 64.7 zinc finger protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0066751.10 length: 187 aa.
IPR007087 Zinc finger, C2H2-type
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 64-84
121-141
ProfileScan PS50157 ZINC_FINGER_C2H2_2 9.245 62-84
119-141
IPR015880 Zinc finger, C2H2-like
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00355 no description 0.051 62-84
119-141
no_ID  
HMMPanther PTHR23224 ZINC 8.6e-05 62-141
HMMPanther PTHR23224:SF354GONADOTROPIN INDUCIBLE 8.6e-05 62-141
Seg seg seg NA 143-155
superfamily SSF57667 C2H2 0.00011 114-150
57-93