Jatropha Genome Database

JcCA0066651.20 (JcS_202774.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0066651
Scaffold:
JcS_202774 JcCD0162226(+) =JcCA0066651(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SGR4_RICCO 605 86.8 92.2 (tr|B9SGR4) DNA replication licensing factor MCM8, putative OS=Ricinus communis GN=RCOM_0819630 PE=3 SV=1
Arabidopsis_pep AT3G09660.1 404 61.6 76.8 | Symbols: MCM8 | MCM8; ATP binding / DNA binding / DNA-dependent ATPase/ nucleoside-triphosphatase/ nucleotide binding | chr3:2961314-2966166 REVERSE
soybean_pep Glyma19g36230.1 384 76.2 85.8  
Medicago_pep IMGA|Medtr7g120880.1 404 59.0 70.8 MCM; Nucleic acid-binding, OB-fold, subgroup chr07_pseudomolecule_IMGAG_V3 28341732-28334597 H EGN_Mt090430 20090702
grape_pep GSVIVT01025534001 277 60.2 74.8  
castor_bean_cds 29805.m001487 1051 87.8 87.8 DNA replication licensing factor MCM8, putative
castor_bean_pep 29805.m001487 605 86.8 92.2 DNA replication licensing factor MCM8, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0066651.20 length: 365 aa.
IPR001208 DNA-dependent ATPase MCM
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006260 DNA replication    
HMMSmart SM00350 no description 0.00039 139-363
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 9e-21 140-274
IPR016027 Nucleic acid-binding, OB-fold-like
superfamily SSF50249 Nucleic 3e-47 71-273
no_ID  
HMMPanther PTHR11630 DNA 3.1e-69 95-331
HMMPanther PTHR11630:SF47 DNA 3.1e-69 95-331