Jatropha Genome Database

JcCA0060621.10 (JcS_100401.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0060621
Scaffold:
JcS_100401 JcCA0139851(-) =JcCB0492621(-) =JcCB0318551(-) =JcCB0550651(-) =JcCA0060621(+) =JcPR01E1J32(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SQS5_RICCO 271 97.7 99.2 (tr|B9SQS5) 3-isopropylmalate dehydratase, putative OS=Ricinus communis GN=RCOM_1217310 PE=4 SV=1
Arabidopsis_pep AT4G13430.1 256 87.9 97.7 | Symbols: IIL1 | IIL1 (ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1); 4 iron, 4 sulfur cluster binding / hydro-lyase/ lyase | chr4:7804194-7807789 REVERSE
soybean_pep Glyma17g37540.1 268 94.7 99.2  
Medicago_pep IMGA|Medtr1g065760.1 270 97.7 100.0 Cis-homoaconitase; ; ; chr01_pseudomolecule_IMGAG_V3 13193763-13202569 E EGN_Mt090430 20090702
grape_pep GSVIVT01029978001 264 95.4 98.5  
castor_bean_cds 30008.m000797 458 89.6 89.6 3-isopropylmalate dehydratase, putative
castor_bean_pep 30008.m000797 271 97.7 99.2 3-isopropylmalate dehydratase, putative
JAT_13201ests gi|268517384|gb|FM887326.1|FM887326 391 99.5 99.5 FM887326 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000504, mRNA sequence
KJC_r1 KJC_c01322 761 99.5 99.5  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0060621.10 length: 161 aa.
IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
HMMPfam PF00330 Aconitase 7e-08 30-126
superfamily SSF53732 Aconitase 1.6e-22 1-134
IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.30.499.10 no description 1.4e-16 13-118
IPR015936 Homoaconitase/3-isopropylmalate dehydratase, small/large subunit
Biological Process GO:0008652 cellular amino acid biosynthetic process    
Molecular Function GO:0016836 hydro-lyase activity    
HMMPanther PTHR11670:SF6 3-ISOPROPYLMALATE 2.8e-26 1-118
IPR015937 Aconitase-like core
Biological Process GO:0008152 metabolic process    
HMMPanther PTHR11670 ACONITASE 2.8e-26 1-118
no_ID  
Seg seg seg NA 133-157