| JcS_100183 | JcCB0736301(+) =JcCA0046261(-) =JcCB0428011(+) =JcCB0510081(+) =JcCB0383651(-) =JcCB0123121(-) =JcCA0297911(+) =JcCA0306361(+) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | A5BJD2_VITVI | 1593 | 46.9 | 62.4 | (tr|A5BJD2) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020846 PE=4 SV=1 |
| Arabidopsis_pep | ATMG00860.1 | 85.1 | 33.3 | 52.5 | | Symbols: ORF158 | hypothetical protein | chrM:235916-236392 FORWARD |
| soybean_pep | Glyma06g40570.1 | 1860 | 53.3 | 67.2 | |
| Medicago_pep | IMGA|Medtr4g041210.1 | 370 | 32.1 | 50.1 | RNA-directed DNA polymerase (Reverse transcriptase); Peptidase aspartic, active site; Retrotransposon gag protein; Polynucleotidyl transferase, Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3 9673679-9667953 H EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01018780001 | 213 | 39.4 | 57.5 | |
| castor_bean_cds | --No_Hits-- | ||||
| castor_bean_pep | 29674.m000206 | 189 | 36.0 | 58.1 | conserved hypothetical protein |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCA0046261.60 | length: 1706 aa. | |||
| IPR000477 | RNA-directed DNA polymerase (reverse transcriptase) | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003723 | RNA binding | ||
| Molecular Function | GO:0003964 | RNA-directed DNA polymerase activity | ||
| Biological Process | GO:0006278 | RNA-dependent DNA replication | ||
| HMMPfam | PF00078 | RVT_1 | 6.9e-16 | 883-1036 |
| IPR001584 | Integrase, catalytic core | |||
| Molecular Function | GO:0003677 | DNA binding | ||
| Biological Process | GO:0015074 | DNA integration | ||
| HMMPfam | PF00665 | rve | 2.2e-21 | 1406-1515 |
| ProfileScan | PS50994 | INTEGRASE | 22.337 | 1392-1559 |
| IPR005162 | Retrotransposon gag protein | |||
| HMMPfam | PF03732 | Retrotrans_gag | 4e-17 | 70-160 |
| IPR012337 | Polynucleotidyl transferase, ribonuclease H fold | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| superfamily | SSF53098 | Ribonuclease | 7e-38 | 1396-1552 |
| IPR021109 | Peptidase aspartic | |||
| superfamily | SSF50630 | Acid | 3e-06 | 509-624 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 342-363 1592-1613 |
| Gene3D | G3DSA:3.30.420.10 | no description | 3.2e-30 | 1404-1565 |
| Gene3D | G3DSA:3.30.70.270 | no description | 5.3e-15 | 872-1038 |
| HMMPanther | PTHR10178 | GAG/POL/ENV | 0 | 23-1687 |
| HMMPanther | PTHR10178:SF14 | RETROVIRUS | 0 | 23-1687 |
| Seg | seg | seg | NA | 304-316 394-407 423-434 650-662 764-782 1296-1307 |
| superfamily | SSF56672 | DNA/RNA | 2.7e-151 | 802-1241 |