Jatropha Genome Database

JcCA0046021.30 (JcS_105181.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0046021
Scaffold:
JcS_105181 JcCB0579481(-) =JcCA0046021(-) =JcCB0224631(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl C6TCH7_SOYBN 74.3 69.1 72.7 (tr|C6TCH7) Putative uncharacterized protein OS=Glycine max PE=2 SV=1
Arabidopsis_pep AT3G63190.1 65.9 63.6 67.3 | Symbols: RRF | RRF (RIBOSOME RECYCLING FACTOR, CHLOROPLAST PRECURSOR) | chr3:23342861-23344640 REVERSE
soybean_pep Glyma02g16590.1 74.3 69.1 72.7  
Medicago_pep IMGA|Medtr1g086330.1 68.9 63.6 70.9 Ribosome recycling factor chr01_pseudomolecule_IMGAG_V3 17057287-17050581 F EGN_Mt090430 20090702
grape_pep GSVIVT01001148001 72.0 69.1 70.9  
castor_bean_cds 29647.m002079 107 87.4 87.4 ribosome recycling factor, putative
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0046021.30 length: 59 aa.
IPR002661 Ribosome recycling factor
method AccNumber shortName E-value location
Biological Process GO:0006412 translation    
HMMPanther PTHR20982 RIBOSOME 3.1e-16 1-56
HMMPfam PF01765 RRF 3e-15 1-55
superfamily SSF55194 Ribosome 2.8e-13 1-55
IPR015998 Ribosome recycling factor, bacterial-like
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006415 translational termination    
HMMPanther PTHR20982:SF3 RIBOSOME 3.1e-16 1-56
no_ID  
Coil coil coiled-coil NA 7-42
Gene3D G3DSA:1.10.132.20 no description 1.6e-09 1-55
Seg seg seg NA 10-23