Jatropha Genome Database

JcCA0045971.10 (JcS_201094.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0045971
Scaffold:
JcS_201094 JcCD0206735(-) =JcCD0191519(+) =JcCA0045971(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S563_RICCO 398 82.2 89.6 (tr|B9S563) Serine/threonine-protein kinase PBS1, putative OS=Ricinus communis GN=RCOM_1721640 PE=4 SV=1
Arabidopsis_pep AT3G24660.1 328 72.0 83.5 | Symbols: TMKL1 | TMKL1 (transmembrane kinase-like 1); ATP binding / kinase/ protein serine/threonine kinase | chr3:9003641-9005751 FORWARD
soybean_pep Glyma08g47200.1 355 74.1 84.8  
Medicago_pep IMGA|Medtr1g046850.1 100 42.4 58.9 Tyrosine protein kinase, active site chr01_pseudomolecule_IMGAG_V3 11073033-11071073 E EGN_Mt090430 20090702
grape_pep GSVIVT01028547001 349 72.6 83.4  
castor_bean_cds 30204.m001798 690 87.1 87.1 Serine/threonine-protein kinase PBS1, putative
castor_bean_pep 30204.m001798 398 82.2 89.6 Serine/threonine-protein kinase PBS1, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0045971.10 length: 287 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.0085 211-230
236-254
259-278
IPR020474 Toll-like receptor, leucine rich repeat-containing
FPrintScan PR00019 LEURICHRPT 3.2e-05 236-249
257-270
no_ID  
Gene3D G3DSA:3.80.10.10 no description 9.9e-34 41-275
HMMPanther PTHR23258 SERINE-THREONINE 1.7e-40 97-277
Seg seg seg NA 8-22
33-40
109-122
superfamily SSF52058 L 2.1e-32 72-275