Jatropha Genome Database

JcCA0045831.40 (JcS_103607.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0045831
Scaffold:
JcS_103607 JcCA0045831(-) =JcCB0219281(+) =JcCA0129501(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9R976_RICCO 144 96.1 98.7 (tr|B9R976) Transcription regulator, putative OS=Ricinus communis GN=RCOM_1514610 PE=4 SV=1
Arabidopsis_pep AT1G74500.1 119 79.2 92.2 | Symbols: | bHLH family protein | chr1:27998298-27998668 REVERSE
soybean_pep Glyma04g34080.1 138 92.1 97.4  
Medicago_pep IMGA|Medtr5g040160.1 115 75.3 89.6 Helix-loop-helix DNA-binding chr05_pseudomolecule_IMGAG_V3 17108849-17107589 F EGN_Mt090430 20090702
grape_pep GSVIVT01008034001 128 86.8 93.4  
castor_bean_cds 30147.m014102 309 89.2 89.2 transcription regulator, putative
castor_bean_pep 30147.m014102 144 96.1 98.7 transcription regulator, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0045831.40 length: 92 aa.
IPR001092 Helix-loop-helix DNA-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0030528 transcription regulator activity    
Biological Process GO:0045449 regulation of transcription    
HMMPfam PF00010 HLH 0.00012 23-60
ProfileScan PS50888 HLH 8.972 4-61
IPR011598 Helix-loop-helix DNA-binding
Cellular Component GO:0005634 nucleus    
Molecular Function GO:0030528 transcription regulator activity    
Biological Process GO:0045449 regulation of transcription    
superfamily SSF47459 HLH, 4.6e-06 19-83
no_ID  
Coil coil coiled-coil NA 57-78
Seg seg seg NA 2-16