Jatropha Genome Database

JcCA0045831.20 (JcS_103607.30)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0045831
Scaffold:
JcS_103607 JcCA0045831(-) =JcCB0219281(+) =JcCA0129501(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q9FG26_ARATH 64.7 48.4 64.5 (tr|Q9FG26) Non-LTR retroelement reverse transcriptase-like OS=Arabidopsis thaliana PE=4 SV=1
Arabidopsis_pep AT5G42905.1 56.6 46.8 58.1 | Symbols: | nucleic acid binding / ribonuclease H | chr5:17201414-17202323 REVERSE
soybean_pep Glyma13g29590.1 52.4 42.6 61.1  
Medicago_pep IMGA|Medtr7g089810.1 58.2 43.3 61.7 Ribonuclease H chr07_pseudomolecule_IMGAG_V3 19855204-19852776 E EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds --No_Hits--        
castor_bean_pep 30136.m001034 59.7 42.6 60.7 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0045831.20 length: 63 aa.
IPR015706 RNA-directed DNA polymerase (reverse transcriptase), related
method AccNumber shortName E-value location
HMMPanther PTHR19446 REVERSE 1.1e-07 4-63
no_ID  
HMMPanther PTHR19446:SF97 NON-LTR 1.1e-07 4-63