Jatropha Genome Database

JcCA0045271.20  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0045271
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RM42_RICCO 674 87.0 91.2 (tr|B9RM42) Peptide chain release factor, putative OS=Ricinus communis GN=RCOM_1077620 PE=4 SV=1
Arabidopsis_pep AT5G36170.2 634 79.4 89.2 | Symbols: HCF109, ATPRFB | HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release factor/ translation release factor, codon specific | chr5:14236083-14237974 REVERSE
soybean_pep Glyma09g38380.1 649 82.6 89.2  
Medicago_pep IMGA|Medtr7g090040.1 639 81.5 88.7 Peptide chain release factor 2, putative chr07_pseudomolecule_IMGAG_V3 19982038-19977669 E EGN_Mt090430 20090702
grape_pep GSVIVT01019055001 670 87.7 90.9  
castor_bean_cds 29929.m004546 1239 89.0 89.0 peptide chain release factor, putative
castor_bean_pep 29929.m004546 674 87.0 91.2 peptide chain release factor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0045271.20 length: 379 aa.
IPR000352 Class I peptide chain release factor
method AccNumber shortName E-value location
Molecular Function GO:0003747 translation release factor activity    
Biological Process GO:0006415 translational termination    
HMMPfam PF00472 RF-1 3.7e-36 231-341
PatternScan PS00745 RF_PROK_I NA 248-264
IPR004374 Peptide chain release factor 2
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006415 translational termination    
Molecular Function GO:0016149 translation release factor activity, codon specific    
HMMPanther PTHR11075:SF6 PEPTIDE 5.5e-212 1-372
HMMTigr TIGR00020 prfB: 2.1e-139 1-369
IPR005139 Peptide chain release factor
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006415 translational termination    
Molecular Function GO:0016149 translation release factor activity, codon specific    
HMMPfam PF03462 PCRF 6.9e-32 89-197
no_ID  
Coil coil coiled-coil NA 98-119
HMMPanther PTHR11075 PEPTIDE 5.5e-212 1-372
Seg seg seg NA 25-42
superfamily SSF75620 Release 7e-89 4-369