Jatropha Genome Database

JcCA0045261.10 (JcS_103041.50)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0045261
Scaffold:
JcS_103041 JcCA0151491(-) =JcCB0037361(+) =JcCA0045261(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q9AU17_SOLCI 145 33.2 49.1 (tr|Q9AU17) Polyprotein-like OS=Solanum chilense PE=4 SV=1
Arabidopsis_pep --No_Hits--        
soybean_pep Glyma15g42470.1 89.0 25.4 42.8  
Medicago_pep IMGA|Medtr4g110620.1 132 42.6 57.4 polyprotein-like, related chr04_pseudomolecule_IMGAG_V3 25158785-25159321 H EGN_Mt090430 20090702
grape_pep GSVIVT01016108001 47.0 21.4 40.6  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0045261.10 length: 256 aa.
IPR001878 Zinc finger, CCHC-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF00098 zf-CCHC 7.7e-06 230-246
HMMSmart SM00343 no description 0.00016 230-246
ProfileScan PS50158 ZF_CCHC 9.455 231-246
no_ID  
Seg seg seg NA 43-65
92-105
218-228