| JcS_109388 | JcCB0290201(-) =JcCA0044231(+) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B8AWH5_ORYSI | 248 | 38.9 | 58.2 | (tr|B8AWH5) Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20882 PE=4 SV=1 |
| Arabidopsis_pep | AT1G43760.1 | 100 | 30.5 | 51.1 | | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G40390.1); Has 2614 Blast hits to 2551 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 1517; Fungi - 2; Plants - 1086; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr1:16528880-16531065 REVERSE |
| soybean_pep | Glyma01g16600.1 | 197 | 32.4 | 53.2 | |
| Medicago_pep | IMGA|Medtr7g047570.1 | 208 | 33.7 | 53.8 | RNA-directed DNA polymerase (Reverse transcriptase) chr07_pseudomolecule_IMGAG_V3 11971058-11973594 E EGN_Mt090430 20090702 |
| grape_pep | --No_Hits-- | ||||
| castor_bean_cds | --No_Hits-- | ||||
| castor_bean_pep | 48288.m000018 | 92.8 | 24.5 | 47.8 | conserved hypothetical protein |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCA0044231.30 | length: 947 aa. | |||
| IPR000477 | RNA-directed DNA polymerase (reverse transcriptase) | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003723 | RNA binding | ||
| Molecular Function | GO:0003964 | RNA-directed DNA polymerase activity | ||
| Biological Process | GO:0006278 | RNA-dependent DNA replication | ||
| HMMPfam | PF00078 | RVT_1 | 2.1e-26 | 585-736 |
| IPR015706 | RNA-directed DNA polymerase (reverse transcriptase), related | |||
| HMMPanther | PTHR19446 | REVERSE | 1.3e-103 | 384-736 |
| no_ID | ||||
| HMMPanther | PTHR19446:SF34 | NON-LTR | 1.3e-103 | 384-736 |
| Seg | seg | seg | NA | 19-32 146-163 |