| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | Q8H6Q8_PONTR | 477 | 72.1 | 84.6 | (tr|Q8H6Q8) CTV.20 OS=Poncirus trifoliata GN=CTV.20 PE=4 SV=1 |
| Arabidopsis_pep | --No_Hits-- | ||||
| soybean_pep | Glyma20g06230.1 | 214 | 47.3 | 61.7 | |
| Medicago_pep | IMGA|AC234026_1.1 | 157 | 34.1 | 52.0 | RNA-directed DNA polymerase (Reverse transcriptase) AC234026.1 2154-4412 H EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01018780001 | 73.9 | 28.0 | 49.4 | |
| castor_bean_cds | --No_Hits-- | ||||
| castor_bean_pep | --No_Hits-- | ||||
| JAT_13201ests | gi|268516665|gb|FM887144.1|FM887144 | 272 | 82.0 | 82.0 | FM887144 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000247, mRNA sequence |
| KJC_r1 | KJC_c05637 | 101 | 86.5 | 86.5 |
| JcCA0041501.20 | length: 1295 aa. | |||
| IPR000477 | RNA-directed DNA polymerase (reverse transcriptase) | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003723 | RNA binding | ||
| Molecular Function | GO:0003964 | RNA-directed DNA polymerase activity | ||
| Biological Process | GO:0006278 | RNA-dependent DNA replication | ||
| HMMPfam | PF00078 | RVT_1 | 2.3e-23 | 1051-1196 |
| ProfileScan | PS50878 | RT_POL | 12.934 | 1014-1196 |
| IPR001878 | Zinc finger, CCHC-type | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMPfam | PF00098 | zf-CCHC | 0.00012 | 601-616 |
| ProfileScan | PS50158 | ZF_CCHC | 9.537 | 602-616 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 17-38 |
| Gene3D | G3DSA:3.30.70.270 | no description | 2.4e-20 | 1031-1197 |
| HMMPanther | PTHR10178 | GAG/POL/ENV | 3.6e-67 | 611-1294 |
| HMMPanther | PTHR10178:SF14 | RETROVIRUS | 3.6e-67 | 611-1294 |
| Seg | seg | seg | NA | 254-268 549-568 576-598 691-712 714-725 769-781 889-906 920-947 |
| superfamily | SSF56672 | DNA/RNA | 2.1e-88 | 972-1294 |