Jatropha Genome Database

JcCA0040611.10 (JcS_201965.30)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0040611
Scaffold:
JcS_201965 JcCB0341121(-) =JcCA0040611(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5BP26_VITVI 142 48.2 66.9 (tr|A5BP26) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034590 PE=4 SV=1
Arabidopsis_pep AT1G21280.1 84.7 30.1 53.4 | Symbols: | unknown protein | chr1:7447690-7448403 REVERSE
soybean_pep Glyma20g39450.2 159 50.7 68.9  
Medicago_pep IMGA|Medtr5g093020.1 145 47.3 66.9 Polynucleotidyl transferase, Ribonuclease H fold, related chr05_pseudomolecule_IMGAG_V3 36507044-36505941 H EGN_Mt090430 20090702
grape_pep GSVIVT01029816001 74.7 28.9 61.4  
castor_bean_cds --No_Hits--        
castor_bean_pep 29766.m000122 78.6 49.4 59.0 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0040611.10 length: 172 aa.
IPR005162 Retrotransposon gag protein
method AccNumber shortName E-value location
HMMPfam PF03732 Retrotrans_gag 1.4e-05 106-159